Insertion junction: CLIP2.009282_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009282
Chromosome:chromosome 12
Location:3395564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497900 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCATGCGCCAAGCTACACCCGAAGGCCATGCTGCTGGTAGGCCCGGCA
Internal bar code:TGAATTTGGGGTCGATATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACACGCACACACTGTTG
Suggested primer 2:GTACGAGGCGTATGGACCAG