Insertion junction: CLIP2.009286_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009286
Chromosome:chromosome 1
Location:3603093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023500 FAL2 Similar to Flagellar Associated Protein FAP234 CDS
Cre01.g023550 FAP234,TPG2 Flagellar Associated Protein 234; (1 of 1) PTHR24365//PTHR24365:SF301 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCAGAAGCTGAGGTACGGGCGGCAGCGGAGGCGCGGGCAGCGGCGGC
Internal bar code:TTAGCAAGCTGCGTATCGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1411
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGTCAGATCTTCCTCC
Suggested primer 2:GTGTGTGGAAGCTTGCAAGG