Insertion junction: CLIP2.009295_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009295
Chromosome:chromosome 1
Location:2404257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013800 SXD1,TCY1 (1 of 1) PF14392 - Zinc knuckle (zf-CCHC_4); Zinc finger containing protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGGCCGATAGCGAAGGCGCGCCGGCCAGCAACGGGGATGACGACGGC
Internal bar code:CAGGTACAGTCCTGATATTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCCCGAACTATGTCCGC
Suggested primer 2:TCGAAGTGATGCGTGTTGGA