Insertion junction: CLIP2.009295_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009295
Chromosome:chromosome 1
Location:2404258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013800 SXD1,TCY1 (1 of 1) PF14392 - Zinc knuckle (zf-CCHC_4); Zinc finger containing protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCCGCCGCTGACCCGGGCGCTTGGCGTGCTCGCCTTGCAGCATTGGC
Internal bar code:GAAGCAGAACGACTGTCTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2871
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAGTGATGCGTGTTGGA
Suggested primer 2:AAGTCCCGAACTATGTCCGC