Insertion junction: CLIP2.009310_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009310
Chromosome:chromosome 8
Location:3553065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379350 TPT10,TPT phosphate/phosphoenolpyruvate translocator; (1 of 2) PTHR11132:SF70 - PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATAAATGTACCCCCTCCCCTCCCGCGCTGCAGGCACGGCCCTGGCTCT
Internal bar code:ACAGTAGTAATATTTCATTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2712
LEAP-Seq percent confirming:99.1803
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:122

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGTTCGGAACACCGGTC
Suggested primer 2:GCCTTTTCCGTTCCGCTTTT