Insertion junction: CLIP2.009315_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009315
Chromosome:chromosome 10
Location:163369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g418800 DIV156 (1 of 7) IPR000048//IPR027417 - IQ motif, EF-hand binding site // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATCACACCTACCTTGTGTGAAAGCAAGCGCTCATGGAAGCTGGCTGT
Internal bar code:CATACATCGCGGCGTGTACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCGGCAAATTTCCGTGC
Suggested primer 2:ACTACACAGCATGGCCACTC