Insertion junction: CLIP2.009318_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009318
Chromosome:chromosome 6
Location:8017762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304800 (1 of 1) PTHR11216//PTHR11216:SF61 - EH DOMAIN // GH06923P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGAGGGAGTGTGCTTTCCGGGGTGGCACCCGGCGCGAGGGTAGTTG
Internal bar code:TATAGGCCTGTCGGATGGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1257
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGCGGTGTATCCAAGG
Suggested primer 2:GTGTAGCAGGTGGGAGGTTC