Insertion junction: CLIP2.009321_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009321
Chromosome:chromosome 16
Location:243372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694500 CGL57,DNJ37 (1 of 1) PTHR24078//PTHR24078:SF190 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; DnaJ-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGTCATTGCCTTTGCCGCGAAAATGCTCACGGCCCTGCGCCTCGCGG
Internal bar code:CGGTTTTAGGTAGGCCAAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:3.22581
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACAGCTACAGCCTGAG
Suggested primer 2:GCAACAAACACAAAGCACGC