Insertion junction: CLIP2.009324_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009324
Chromosome:chromosome 5
Location:1254463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241637 FAP32,IFT46 Intraflagellar transport protein 46; (1 of 1) PTHR13376//PTHR13376:SF0 - UNCHARACTERIZED // INTRAFLAGELLAR TRANSPORT PROTEIN 46 HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTGGAGAGCCTGCACGTGCTGTTCACACTGTACCTGGAGTTCAAGAA
Internal bar code:CAGTGTGGAATCATACGGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1213
LEAP-Seq percent confirming:52.9412
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGAGGAACACACTTGA
Suggested primer 2:GGCAAGGATGTGTTTTGCGT