Insertion junction: CLIP2.009342_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009342
Chromosome:chromosome 10
Location:1307036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427250 PRO1,PFN1,PRF1,DIV68 (1 of 1) K05759 - profilin (PFN); Profilin 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTACCCCTGGTCCGCGAGGTAGTCAGCCAGAGCCTCCACCACCTTGTT
Internal bar code:TACAACCATGGACTTGGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTGATGGGGGAGGTTTG
Suggested primer 2:TGTTACAACCTCCTCGGCAC