Insertion junction: CLIP2.009353_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009353
Chromosome:chromosome 6
Location:5011994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281700 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCGGCGAAGTGACCGTGCGAAGTGACCCACGTGGGGCGATGCACGT
Internal bar code:TTTTGATTTGTTAACCCGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3648
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGTTAGCACAACAACAA
Suggested primer 2:AGTACCTGTTCAAGACGCGG