Insertion junction: CLIP2.009356_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009356
Chromosome:chromosome 12
Location:2278440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508350 TPR2,TPR11 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Tetratricopeptide-repeat protein 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAACAGCACGCAGCGCGCACTCGCCAGCTCCCCAGCTTCCCACAACC
Internal bar code:TTGTTGGCTTGAGCTGGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:56.5217
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGACCGGCAATAGATGTA
Suggested primer 2:GTGTCGGTTCAAGCCTACCA