Insertion junction: CLIP2.009371_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009371
Chromosome:chromosome 16
Location:5830563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679900 XRN3 5' to 3' exoribonuclease; (1 of 1) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCAATTCTTGCAAGTGCGCACGCTCCTCCCACCTCCTTTTCCCTACGG
Internal bar code:GAGTTGATATTGCCCCGCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCGCGAAGAAGTTACC
Suggested primer 2:GCCTTGCCCTAACCAGTGAT