Insertion junction: CLIP2.009378_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009378
Chromosome:chromosome 9
Location:1947042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801010 (1 of 28) PTHR31600:SF2 - TINY MACROCYSTS PROTEIN B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCACGCTCAAGTCCCCACCGCCCCACGGATGGGCTTTGCATTGCAGCC
Internal bar code:TCTCAAAGGACGATCGCTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3085
LEAP-Seq percent confirming:99.3976
LEAP-Seq n confirming:165
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:166

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGTTGGTATGCACGATT
Suggested primer 2:TGCACGCACTTGCTGTTAAC