Insertion junction: CLIP2.009379_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009379
Chromosome:chromosome 12
Location:4399021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801411 (1 of 1) PTHR11649//PTHR11649:SF49//PTHR22916//PTHR22916:SF9 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED // GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTAACACACACGTAGGCCTGACTCACGTGCGGGCTGTCCACGTTGA
Internal bar code:AAGGGTGCTCACCATGTGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2853
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGCTGGCGAAAGGTGGT
Suggested primer 2:TACACCACACACTCGCACTC