Insertion junction: CLIP2.009380_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009380
Chromosome:chromosome 1
Location:1705731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009400 NSS2 (1 of 2) PTHR11819//PTHR11819:SF12 - SODIUM/SOLUTE SYMPORTER // HIGH-AFFINITY CHOLINE TRANSPORTER 1; Sodium:solute symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGAGAGCCTCTGTGCGCATGTCTACCCCCTCACTCGCCCACGCTGCG
Internal bar code:GAGAGATCGTACTTGGCAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:190
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCATACACTGTCCTACGC
Suggested primer 2:CGCTCATCACCTCGACTCTC