Insertion junction: CLIP2.009382_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009382
Chromosome:chromosome 7
Location:503154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315850 (1 of 2) IPR000104//IPR000945//IPR020683 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACTTGTCACACCGGTACCTCGGCAACCCTATCAATTTTACACCCTCC
Internal bar code:AAGTAGGAATCTGGCGGTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3595
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTTTTGTGCCACTGAGC
Suggested primer 2:CTGCCTCTCTCAGCCATAGC