Insertion junction: CLIP2.009388_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009388
Chromosome:chromosome 2
Location:7066597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389949 (1 of 2) IPR000242//IPR000387//IPR003595//IPR029021 - PTP type protein phosphatase // Tyrosine specific protein phosphatases domain // Protein-tyrosine phosphatase, catalytic // Protein-tyrosine phosphatase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGTTGCACCGGGAGTGAGAAGGGATGAGTAATAGGGTGCGCTTGTGT
Internal bar code:CCCGGTTTTGTTCCGTGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3300
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCAACACACTGTCCCTT
Suggested primer 2:CGTTATAGCGCAGGTGCAAC