Insertion junction: CLIP2.009395_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009395
Chromosome:chromosome 8
Location:1146296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362950 (1 of 3) IPR002202 - Hydroxymethylglutaryl-CoA reductase, class I/II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGATAGTACACTTCTGCAGCCACGGCAGCGGCCTAGTACTGCACCCGG
Internal bar code:GAGCCGATGTATATCTGGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1395
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTTACCACCCGTGTGACG
Suggested primer 2:CCTGCCAAGGCCAAATCCTA