Insertion junction: CLIP2.009403_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009403
Chromosome:chromosome 8
Location:581953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359900 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGGAGGAGGGCCGGGGAGCGGCGTGGGATGGCGGGTGTGCGTTGGTT
Internal bar code:GGTGATTAACGTGTAGATCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGTCGGAAAGATGCCC
Suggested primer 2:GTTGGTCTCGAGTCAGCCAA