Insertion junction: CLIP2.009404_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009404
Chromosome:chromosome 3
Location:732107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145967 (1 of 2) K15437 - aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (AIMP1, ARC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGCACAGCTGTGGCGGTAAAAGTTTGAGAATATCTGAGGCTTGGTCC
Internal bar code:ATCATTCCAAAACACAGTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGTATTTACAACCCCCGCCA
Suggested primer 2:TTGACAGGATCGTGTGGTGG