Insertion junction: CLIP2.009408_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009408
Chromosome:chromosome 6
Location:5676583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGTGGGGCACACATCCTTGTTCGTATCCCCATGTGCAGACCTTGATT
Internal bar code:GGGTCGGTCAGCTATGCTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2676
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATATTGGGCACTGACCG
Suggested primer 2:GATCACCACCACCTCACTGG