Insertion junction: CLIP2.009411_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009411
Chromosome:chromosome 9
Location:5366311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407950 (1 of 2) IPR004911//IPR012336 - Gamma interferon inducible lysosomal thiol reductase GILT // Thioredoxin-like fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGTGCATTTGCTTGCTGGTCGCCGGTTTGGCTGCGCTCGCGGGGGCG
Internal bar code:AGAGCTGGATTACTTGCGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCTGTGTGTGTGTGTGT
Suggested primer 2:GGCCTGTATCTAGTGCCGTC