Insertion junction: CLIP2.009413_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009413
Chromosome:chromosome 16
Location:3783952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686285 (1 of 21) IPR011016 - Zinc finger, RING-CH-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCAAGCACAGGGCTTTACCAGCGCGCCCTCTGAGCTCAAGCAAATCC
Internal bar code:TCGGTAAAACGTTTAGCTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2295
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGTCATCGTGCACGTCA
Suggested primer 2:AATCGTGGCGAACAGACTGT