Insertion junction: CLIP2.009417_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009417
Chromosome:chromosome 2
Location:1705612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085950 (1 of 1) PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCCTTGCGGCCGCCGGAGCGTGCGCACATGCACGCAAGGCCTGCTG
Internal bar code:TTTCGGATGCGCGAGCTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:92.4528
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCTGCACATAATCCAAG
Suggested primer 2:AAGCTGTGGAAGAAGGAGCC