Insertion junction: CLIP2.009417_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009417
Chromosome:chromosome 2
Location:1705616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085950 (1 of 1) PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGCGCAAGGCCCCCCAACACGCCCCAACGGTGTGACAGCACCAGAA
Internal bar code:TGCGAGAGCAATTCAATATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2984
LEAP-Seq percent confirming:87.7551
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGTGGAAGAAGGAGCC
Suggested primer 2:GGCGCTGCACATAATCCAAG