Insertion junction: CLIP2.009417_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009417
Chromosome:chromosome 6
Location:1206348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258363 (1 of 1) IPR000048//IPR001611//IPR003591 - IQ motif, EF-hand binding site // Leucine-rich repeat // Leucine-rich repeat, typical subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGCCGCCGCGGCGCGCTCCTCCGCAGCGCGGCGCTCTACCTCCGCTG
Internal bar code:ACTAGTGTTTTCTACTAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1486
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTGCTATGTGGCCAGAC
Suggested primer 2:AGCATCCTCTGTGTGAGTGC