Insertion junction: CLIP2.009421_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009421
Chromosome:plastome
Location:181475
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802330 orf2971,ftsH,ChreCp065,2716962 ATP-dependent zinc metalloprotease; (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTTAGTCTTACATTATTAAAAAAACAGTTTGTAACAGTAAAACCATT
Internal bar code:TATTTGCTACACGGAATTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:17.2414
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCTAGCTGGTCCTAGTG
Suggested primer 2:GCAAAGGAAACTCAGAGAGCC