Insertion junction: CLIP2.009426_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009426
Chromosome:chromosome 3
Location:5793992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187700 HEL19 (1 of 1) PTHR24031//PTHR24031:SF252 - RNA HELICASE // SUBFAMILY NOT NAMED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTTGGATTACATGCCCGAGGCACGAGCCCAACCAAGCAGGCCCCCTT
Internal bar code:TGATTATAAGCGCTTTGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:952
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGTCAGCATTCTCCTTT
Suggested primer 2:GGGATGAGAGGGGAGAGGTT