Insertion junction: CLIP2.009432_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009432
Chromosome:chromosome 10
Location:5508845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458000 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCATGTGCACCTCAAAACGCGCCCTTGTCATGCCTGCATTTCGCAGA
Internal bar code:TTAGATAGTCAACCTTCAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1828
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATTCCCACCCGGTATG
Suggested primer 2:GCTTGTGTCTCACCTCGACA