Insertion junction: CLIP2.009434_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009434
Chromosome:chromosome 12
Location:1287240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489500 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTAGGATCCATACGTCAGGACCACGAGGCGAGACTGGCGTGCCCTCC
Internal bar code:CTTAGTGCAGCTGACCGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1030
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGTTCGATGCTCAACC
Suggested primer 2:ACCTACAGCCGTCACAACAG