Insertion junction: CLIP2.009438_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009438
Chromosome:chromosome 6
Location:2361095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268050 HTA10 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGCTGCTGGGCGAGGTGACCATCGCCTCGGGCGGTGTGCTGCCCAAC
Internal bar code:AAAATCCTTAAAGAATACATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACCCGCCGAATCGAATC
Suggested primer 2:GTTGTTGATGCGGCAAAGGT