Insertion junction: CLIP2.009438_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009438
Chromosome:chromosome 6
Location:2361101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268050 HTA10 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATCGTTGCGAATGGCCAGCTGGATGTGGCGGGGCACAATGCGGTTC
Internal bar code:CGCCTATGGATTGGATGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3677
LEAP-Seq percent confirming:82.9787
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTTGATGCGGCAAAGGT
Suggested primer 2:ACTACCCGCCGAATCGAATC