Insertion junction: CLIP2.009442_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009442
Chromosome:chromosome 12
Location:2949630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502251 (1 of 1) PTHR31065:SF4 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGTTGCATGCAGCCGGCGCCACAGTAGCAGCGCCGTGTGGCCTGA
Internal bar code:GTTACTCAACGCTCAGGGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:18.75
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCTGACTCCCACGAGAG
Suggested primer 2:AGTCCCGTGCAACCGTAAAA