Insertion junction: CLIP2.009463_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009463
Chromosome:chromosome 6
Location:8030992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304913 (1 of 14) PF01476 - LysM domain (LysM) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTTGCGAGCAGCGTCATGGCTCCCGGTTCGGGCGGCGATGACGACCT
Internal bar code:AGGAGAGATTCCGCTTAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1008
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:ATGACACATCAAGCCCCTCG