Insertion junction: CLIP2.009471_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009471
Chromosome:chromosome 12
Location:3126727
Confidence (%):40
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00075855

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAAATGCCCTTACACGAAACGGGTCTTTTTACTTCTGACTTGCCTTT
Internal bar code:GGGTGGGGGTGACATATAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1957
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTAACCCGCAGCTAACAA
Suggested primer 2:CACGCCGATGCATTGAGAAG