Insertion junction: CLIP2.009479_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009479
Chromosome:chromosome 1
Location:4006748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026300 (1 of 3) PF08238 - Sel1 repeat (Sel1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGACACTGTGCTTGCGATTGTGCAAGGCCGTGTGCAGGCGAGTAAGTT
Internal bar code:TGTGGTGGCAGGGTACATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCTTCAGCTGGTTTGTG
Suggested primer 2:GAGACGCGGATGGAGTTAGG