Insertion junction: CLIP2.009479_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009479
Chromosome:chromosome 1
Location:4006749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026300 (1 of 3) PF08238 - Sel1 repeat (Sel1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCCTTTCCAAACTCGCACTGTTGGGGCGCCCGATCGTCAACACAAG
Internal bar code:TGTGGTGGCAGGGTACATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:972
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACGCGGATGGAGTTAGG
Suggested primer 2:GTGGCTTCAGCTGGTTTGTG