Insertion junction: CLIP2.009482_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009482
Chromosome:chromosome 7
Location:4066700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340550 (1 of 1) IPR001878//IPR006568 - Zinc finger, CCHC-type // PSP, proline-rich CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGAACAGCACCAGGCGCGGCTCTGACGGCAGCAGCATGTCGACGGGT
Internal bar code:TATGTTTTACATCAAAAGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1671
LEAP-Seq percent confirming:14.7059
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGGCACTGGTCTGTAC
Suggested primer 2:GTTGCTGTTCTTGCTGGTGG