Insertion junction: CLIP2.009482_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009482
Chromosome:chromosome 7
Location:4066701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340550 (1 of 1) IPR001878//IPR006568 - Zinc finger, CCHC-type // PSP, proline-rich CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTCAACGCGCCGCCGCCAGGGGCCGTCCGGATGCGCGTCAAGGCGGC
Internal bar code:TTAAAGCAGTGTTCGGTCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1058
LEAP-Seq percent confirming:13.4146
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:71
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCTGTTCTTGCTGGTGG
Suggested primer 2:CTGGAGGCACTGGTCTGTAC