Insertion junction: CLIP2.009488_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009488
Chromosome:chromosome 13
Location:3484221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587500 AOF8 (1 of 2) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACCACGCCTGCTACCAACCCTATGCCTGTAACCACACTTTCCCCAT
Internal bar code:TCACGGACGTTGCAAAACTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:89
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTAGGGCAAGGGACAGGC
Suggested primer 2:GGGAAACGGAGGTAAACGGT