Insertion junction: CLIP2.009491_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009491
Chromosome:chromosome 7
Location:3008539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333535 (1 of 1) K04856 - voltage-dependent calcium channel T type alpha-1I (CACNA1I) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGGATGTGGGCCGAGGCGTCGTGGAGCAGCAGGGCGAGCGGCGCCA
Internal bar code:GGCGAGTGGCTATAAAGTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4664
LEAP-Seq percent confirming:89.7959
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCAGCATCAGGAAGTC
Suggested primer 2:TGTGTGTGTGTGTGTTGGGA