Insertion junction: CLIP2.009494_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009494
Chromosome:chromosome 5
Location:1134373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248300 NRAMP4 Manganese/metal transporter, NRAMP homolog; (1 of 1) K12347 - natural resistance-associated macrophage protein (SLC11A, NRAMP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCTCACAAGCCACACATTTGCAGACACACACGCACTGACACGCCTGC
Internal bar code:TTGTGCGGCAAACGGTTGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGCGACCCCATCAGAG
Suggested primer 2:TCGTTCAGCCTGCTGTTCAT