Insertion junction: CLIP2.009511_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009511
Chromosome:chromosome 16
Location:2403320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659650 (1 of 100) IPR001810 - F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGGTGGCGCCTAGAACCCCCTGCCCTGCCCTGCGCTACCCCCGAGC
Internal bar code:CGTTTATAGGGGGCCGGGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTGCTGCTTCGTGATG
Suggested primer 2:CTGAGCCCAAGCCTAGATGG