Insertion junction: CLIP2.009512_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009512
Chromosome:chromosome 8
Location:2598062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTCCAGCGCTTCCTCTCCGCCGCCCTGCGCCACCGCCGCCAGGTCCA
Internal bar code:TGGTGCTTATGGCAAAATGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2879
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGACACCGCGGAAGAAAT
Suggested primer 2:GACCACAGTATCAGGCCCAC