Insertion junction: CLIP2.009522_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009522
Chromosome:chromosome 2
Location:3657727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100050 P4H-11,PHX6,PFH11 Prolyl 4-hydroxylase 11; (1 of 2) PTHR10869//PTHR10869:SF79 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED CDS
lncRNA_TCONS_00041611 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATCCTGCGCCGCCAGCGAGAGCGCGAAGCGCGCATGGCGGCGGCGG
Internal bar code:GGGATCATGCAAACTGGAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGTTGGTAGGTTGTGG
Suggested primer 2:CGGAAGGGCCAACATCAGAT