Insertion junction: CLIP2.009525_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009525
Chromosome:chromosome 1
Location:5182853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036200 (1 of 1) PF01477//PF07228 - PLAT/LH2 domain (PLAT) // Stage II sporulation protein E (SpoIIE) (SpoIIE) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCAGCATCATCGCGCAGCGCCTCGCGCGCCTGGCCTTTGAGGCGTCG
Internal bar code:ATTAGTGTGCTTCGGATCCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2760
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAACACAGCAAACACAG
Suggested primer 2:ATCTGTCAGGGCCACATTGG