Insertion junction: CLIP2.009533_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009533
Chromosome:chromosome 8
Location:3356953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377600 ATG14 AuTophaGy related; (1 of 1) PF10186 - Vacuolar sorting 38 and autophagy-related subunit 14 (Atg14) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTTGCACGCACACGGTGTCAAGCCGCTCTCCTTTTGCGTGTTCCCTC
Internal bar code:GGGCGAACAAAATTTGTTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:65
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGTGCTGATTGTGTGTG
Suggested primer 2:CACTGTCACGACTCCAGCTT