Insertion junction: CLIP2.009536_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009536
Chromosome:chromosome 3
Location:8223891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200200 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTAGTAATAGCTCGGGCGGTTGGGCGTGCCTGGCCCCACGACACGCCG
Internal bar code:TTATTGGCTAAGGTGTGACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1918
LEAP-Seq percent confirming:72.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAATGGGCGGCATTTACG
Suggested primer 2:TCAGTATGCGGCTCTAAGCG