Insertion junction: CLIP2.009537_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009537
Chromosome:chromosome 13
Location:2068508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576950 (1 of 2) PTHR13690//PTHR13690:SF71 - FAMILY NOT NAMED // PROTEIN C37C3.9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTGCCCCACCGTCAACACGGCCGAAGACACTTCGGCAAGGGCGATGG
Internal bar code:ATTTTACCGATATTACATACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:897
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTCTGTGTTGGACCGTC
Suggested primer 2:TTTGTGTCATGTTGCCTGCG